CLUSTAL O(1.2.4) multiple sequence alignment SP|P0DTC2|SPIKE_SARS2 ----MFVFLVLLPLV-S----------SQCVN--LTT--RTQLPPAY------------- 28 SP|K9N5Q8|SPIKE_MERS1 MIHSVFLLMFLLTPTESYVDVGPDSVKSACIEVDIQQTFFDKTWPRP------------- 47 SP|Q0ZME7|SPIKE_CVHN5 -----MFLIIFILPT-TLAVIGDFNCTNSFIN------DYNKTIPRISED---------- 38 SP|P36334|SPIKE_CVHOC ----MFLILLISLPT-AFAVIGDLKCTSDNIN------DKDTGPPPISTD---------- 39 SP|P15423|SPIKE_CVH22 ------------------------------------------------------------ SP|Q6Q1S2|SPIKE_CVHNL --MKLFLILLVLPLASCFF-----TCNS-NANLS----MLQLGVPDNSSTIVTGLLPTHW 48 SP|P59594|SPIKE_SARS ----MFIFLLFLTLT-S----------GSDLD--RCTTFDDVQAPNY------------- 30 SP|P0DTC2|SPIKE_SARS2 -------TNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVT---WFHAIHVSGTNGTKR 78 SP|K9N5Q8|SPIKE_MERS1 ------IDVSKADGIIYPQGRTYSNITITYQGLF-PYQGDHGDMYVYSAGHATGTTPQKL 100 SP|Q0ZME7|SPIKE_CVHN5 -----VVDVSLGLGTYYVLNRVYLNTTLLFTGYFPKSGANFRDLALKGSIYLS----TLW 89 SP|P36334|SPIKE_CVHOC -----TVDVTNGLGTYYVLDRVYLNTTLFLNGYYPTSGSTYRNMALKGSVLLS----RLW 90 SP|P15423|SPIKE_CVH22 ------------------------------------------------------------ SP|Q6Q1S2|SPIKE_CVHNL FCANQSTSVYSANGFFYIDVGNHRSAFALHTGYYDANQ---YYIYVTNEIGLNAS--VTL 103 SP|P59594|SPIKE_SARS -----TQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVT---GFHTIN-------HT 75 SP|P0DTC2|SPIKE_SARS2 ----FDNP-VLPFNDGVYFAST--------E------------------KSNIIRGWIFG 107 SP|K9N5Q8|SPIKE_MERS1 FVANYSQD-VKQFANGFVVRIG--------A-AANSTGTVIISPSTSATIRKIYPAFMLG 150 SP|Q0ZME7|SPIKE_CVHN5 ----YKPPFLSDFNNGIFSKVK--------N-TKLYVNNT---------LYSEFSTIVIG 127 SP|P36334|SPIKE_CVHOC ----FKPPFLSDFINGIFAKVK--------N-TKVIKDRV---------MYSEFPAITIG 128 SP|P15423|SPIKE_CVH22 ------------------------------------------------------------ SP|Q6Q1S2|SPIKE_CVHNL KICKFSRNTTFDFLSNASSSFDCIVNLLFTEQLGAPLGITISGETVRLHLYNVTRTFYVP 163 SP|P59594|SPIKE_SARS ----FGNP-VIPFKDGIYFAAT--------E------------------KSNVVRGWVFG 104 SP|P0DTC2|SPIKE_SARS2 TTLDSKTQ---------SLLI----VNN--------A-----TNVVIKVC---------- 131 SP|K9N5Q8|SPIKE_MERS1 SSVGNFSDGKMGRFFNHTLVL----LPD--------G-----CGTLLRAF---------- 183 SP|Q0ZME7|SPIKE_CVHN5 SVFVNTSY---------TIVV----QPH-------------NGILEITAC---------- 151 SP|P36334|SPIKE_CVHOC STFVNTSY---------SVVV----QPRTINS-TQDGDNKLQGLLEVSVC---------- 164 SP|P15423|SPIKE_CVH22 -------------MFVLLVAYA---LLHIAGCQTTNG-----LNTSYSVCNGCVGYSENV 39 SP|Q6Q1S2|SPIKE_CVHNL AAYKLTKL-SVKCYFNYSCVFSVVNATVTVNVTTHNG-----RVVNYTVCDDCNGYTDNI 217 SP|P59594|SPIKE_SARS STMNNKSQ---------SVII----INN--------S-----TNVVIRAC---------- 128 . SP|P0DTC2|SPIKE_SARS2 -------------------------------------EFQFCNDPFLGVYYHKNN----- 149 SP|K9N5Q8|SPIKE_MERS1 ---------------------------------------YCILEPRSGNHCPAGNSYTSF 204 SP|Q0ZME7|SPIKE_CVHN5 -------------------------------------QYTMCEYPHTVCKS-KGSIRN-- 171 SP|P36334|SPIKE_CVHOC -------------------------------------QYNMCEYPQTICHPNLGNHRK-- 185 SP|P15423|SPIKE_CVH22 FAVESGGYIPSDFAFNNWFLLTNTSSVVDGVVRSFQPLLLNCLWSVSGLRFTTGFVYF-- 97 SP|Q6Q1S2|SPIKE_CVHNL FSVQQDGRIPNGFPFNNWFLLTNGSTLVDGVSRLYQPLRLTCLWPVPGLKSSTGFVYF-- 275 SP|P59594|SPIKE_SARS -------------------------------------NFELCDNPFFAVSKPMGT----- 146 . SP|P0DTC2|SPIKE_SARS2 ----------------KSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFV 193 SP|K9N5Q8|SPIKE_MERS1 ATYHTPATDCSDGNYNRNASLNSFKEYFNLRNCTFMYTYNITEDEILEWFGITQTAQG-V 263 SP|Q0ZME7|SPIKE_CVHN5 ----------------ESWHIDSSE-PLCLFKKNFTYNVSA------DWL-------YFH 201 SP|P36334|SPIKE_CVHOC ----------------ELWHLDTGV-VSCLYKRNFTYDVNA------DYL-------YFH 215 SP|P15423|SPIKE_CVH22 ---NGTGR-GDCKGFSSDVLSD-----VIRYNLNFEE-------NLRRG--------TIL 133 SP|Q6Q1S2|SPIKE_CVHNL ---NATGSDVNCNGYQHNSVVD-----VMRYNLNFSANSL---DNLKSG--------VIV 316 SP|P59594|SPIKE_SARS --------------------QTHTMIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFV 186 : .* SP|P0DTC2|SPIKE_SARS2 FKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTL------------ 241 SP|K9N5Q8|SPIKE_MERS1 HLFSSRYVDLYGGN---------------MFQFATLPVYDTIKYYSII------------ 296 SP|Q0ZME7|SPIKE_CVHN5 FYQERGVFYAYYADV--GM--------P-TTFLFSLYLGTILSHYYVM------------ 238 SP|P36334|SPIKE_CVHOC FYQEGGTFYAYFTDT--GV--------V-TKFLFNVYLGMALSHYYVM------------ 252 SP|P15423|SPIKE_CVH22 FKTSYGVVVFYCTNNTLVS------------GDAHIPFGTVLGNFYCFVNTTIGNETTSA 181 SP|Q6Q1S2|SPIKE_CVHNL FKTLQYDVLFYCSNSSSGV------------LDTTIPFGPSSQPYYCFINSTINTTHVST 364 SP|P59594|SPIKE_SARS FKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAI------------ 234 . . * : . : : SP|P0DTC2|SPIKE_SARS2 -----LALHRSYL---------------TPGD----SSSGWTAGAAAYYVGYLQPRTFLL 277 SP|K9N5Q8|SPIKE_MERS1 -----PHSIR------------------SIQS----DRKAW----AAFYVYKLQPLTFLL 325 SP|Q0ZME7|SPIKE_CVHN5 -----PLTCN---------------------A----ISSNTDNETLEYWVTPLSRRQYLL 268 SP|P36334|SPIKE_CVHOC -----PLTCN---------------------S----------KLTLEYWVTPLTSRQYLL 276 SP|P15423|SPIKE_CVH22 FVGALPKTVREFVISRTGHFYINGYRYFTLGNVEAVNFNVTTAETTDFCTVALASYADVL 241 SP|Q6Q1S2|SPIKE_CVHNL FVGILPPTVREIVVARTGQFYINGFKYFDLGFIEAVNFNVTTASATDFWTVAFATFVDVL 424 SP|P59594|SPIKE_SARS -----LTAFS---------------------P----AQDIWGTSAAAYFVGYLKPTTFML 264 : . : :* SP|P0DTC2|SPIKE_SARS2 KYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCP 337 SP|K9N5Q8|SPIKE_MERS1 DFSVDGYIRRAIDCGFNDLSQLHCSYESFDVESGVYSVSSFEAKPSGSVVEQAEG-VECD 384 SP|Q0ZME7|SPIKE_CVHN5 NFDEHGVITNAVDCSSSFLSEIQCKTQSFAPNTGVYDLSGFTVKPVATVYRRIPNLPDCD 328 SP|P36334|SPIKE_CVHOC AFNQDGIIFNAEDCMSDFMSEIKCKTQSIAPPTGVYELNGYTVQPIADVYRRKPNLPNCN 336 SP|P15423|SPIKE_CVH22 VNVSQTSIANIIYCN-SVINRLRCDQLSFDVPDGFYSTSPIQSVELPVSIVSLPVY---- 296 SP|Q6Q1S2|SPIKE_CVHNL VNVSATNIQNLLYCD-SPFEKLQCEHLQFGLQDGFYSANFLDDNVLPETYVALPIY---- 479 SP|P59594|SPIKE_SARS KYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIYQTSNFRVVPSGDVVRFPNITNLCP 324 * * . : . :* .: *.*. . SP|P0DTC2|SPIKE_SARS2 FGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNV-- 395 SP|K9N5Q8|SPIKE_MERS1 FSPLLSG-TPPQVYNFKRLVFTNCNYNLTKLLSLFSVNDFTCSQISPAAIASNCYSSL-- 441 SP|Q0ZME7|SPIKE_CVHN5 IDNWLNNVSVPSPLNWERRIFSNCNFNLSTLLRLVHVDSFSCNNLDKSKIFGSCFNSI-- 386 SP|P36334|SPIKE_CVHOC IEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSI-- 394 SP|P15423|SPIKE_CVH22 ----------------HKHTFIVLYV-----------------DFKPQSGGGKCFNCYPA 323 SP|Q6Q1S2|SPIKE_CVHNL ----------------YQHTDINFT--------------------ATASFGGSCYVCKPH 503 SP|P59594|SPIKE_SARS FGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNV-- 382 : . *: SP|P0DTC2|SPIKE_SARS2 ----YADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNY 451 SP|K9N5Q8|SPIKE_MERS1 ----ILDYFSYPLSMKSDLSVSSAGPISQFNYKQSFSNPTCLILATVPHNLTTITKPLKY 497 SP|Q0ZME7|SPIKE_CVHN5 ----TVDKFAIPNRRRDDLQLGSSGFLQSSNYKIDISSSSCQLYYSLPLVNVTINN-FNP 441 SP|P36334|SPIKE_CVHOC ----TIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSR-FNP 449 SP|P15423|SPIKE_CVH22 GVNITLANFNET---KGPLCVDTSHFTTKYVAVYA-----NVGRWSASIN--TGNCPFSF 373 SP|Q6Q1S2|SPIKE_CVHNL QVNISLNG-------NTSVCVRTSHFSIRYIYNRVKSGSPGDSSWHIYLK--SGTCPFSF 554 SP|P59594|SPIKE_SARS ----YADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNY 438 : . . SP|P0DTC2|SPIKE_SARS2 LYRLFRKSNLKP-------------FERDISTEIYQA--GSTPCNGVEGFNCYF------ 490 SP|K9N5Q8|SPIKE_MERS1 SYINKCSRFLSD-------------DRTEVPQLVNAN--QYSPCVSIVPST-VW------ 535 SP|Q0ZME7|SPIKE_CVHN5 SSWNRRYGFGSF---------NLSSYDVVYSDHCFSVNSDFCPCA--DPSV-VNSCAKSK 489 SP|P36334|SPIKE_CVHOC STWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCPCK--LNGSCVGSGPGKN 507 SP|P15423|SPIKE_CVH22 GKVN---------------------NFVKFGSVCFSLKD--------IPGGCAM------ 398 SP|Q6Q1S2|SPIKE_CVHNL SKLN---------------------NFQKFKTICFSTVE--------VPGSCNF------ 579 SP|P59594|SPIKE_SARS KYRYLRHGKLRP-------------FERDISNVPFSP--DGKPCTP-PALNCYW------ 476 SP|P0DTC2|SPIKE_SARS2 ----------------------------------PLQSYGFQP----------------- 499 SP|K9N5Q8|SPIKE_MERS1 ------EDGDYYRK-----------------QLSPLEGGGWLV----------------- 555 SP|Q0ZME7|SPIKE_CVHN5 PPSAICPAGTKYRHCDLDTTLYVKNWCRCSCLPDPISTYSPNTCPQKKVVVGIGEHCPGL 549 SP|P36334|SPIKE_CVHOC NGIGTCPAGTNYLTCD------------NLCTPDPITFTGTYKCPQTKSLVGIGEHCSGL 555 SP|P15423|SPIKE_CVH22 ----------------------------------PIVANWAYS----------------- 407 SP|Q6Q1S2|SPIKE_CVHNL ----------------------------------PLEATWHYT----------------- 588 SP|P59594|SPIKE_SARS ----------------------------------PLNDYGFYT----------------- 485 *: SP|P0DTC2|SPIKE_SARS2 ------------TNGVGYQPYRVVVLSFEL------------L----HAPATVCGP---- 527 SP|K9N5Q8|SPIKE_MERS1 ------------ASGSTVAMTEQLQMGFGI------------TVQYGTDTNSVCPKLEFA 591 SP|Q0ZME7|SPIKE_CVHN5 GINEEKCGTQLNHSSCFCSPDAFLGWSFDSCISNNRCNIFSNFIFNGINSGTTCSN--DL 607 SP|P36334|SPIKE_CVHOC AVKSDYCGG----NSCTCRPQAFLGWSADSCLQGDKCNIFANFILHDVNSGLTCST--DL 609 SP|P15423|SPIKE_CVH22 --------------KYYTIGSLYVSWSDGDGITGV--------------PQPV-----EG 434 SP|Q6Q1S2|SPIKE_CVHNL --------------SYTIVGALYVTWSEGNSITGV--------------PYPV-----SG 615 SP|P59594|SPIKE_SARS ------------TTGIGYQPYRVVVLSFEL------------L----NAPATVCGP---- 513 : . . SP|P0DTC2|SPIKE_SARS2 -KKSTNLVKNKCVNFNFNGLTGTGVLTESNKKF-LPFQQFGRDIADTT-DAVRDPQTLEI 584 SP|K9N5Q8|SPIKE_MERS1 NDTKIASQLGNCVEYSLYGVSGRGVFQNCTAVG-VRQQRFVYDAYQNLVGYYSD--DGNY 648 SP|Q0ZME7|SPIKE_CVHN5 LYSNTEISTGVCVNYDLYGITGQGIFKEVSAAYYNNWQNLLYDSNGNIIG-FKDFLTNKT 666 SP|P36334|SPIKE_CVHOC QKANTDIILGVCVNYDLYGILGQGIFVEVNATYYNSWQNLLYDSNGNLYG-FRDYIINRT 668 SP|P15423|SPIKE_CVH22 VSSFMNVTLDKCTKYNIYDVSGVGVIRVSNDTFLNGIT--YTSTSGNLLG-FKDVTKGTI 491 SP|Q6Q1S2|SPIKE_CVHNL IREFSNLVLNNCTKYNIYDYVGTGIIRSSNQSLAGGIT--YVSNSGNLLG-FKNVSTGNI 672 SP|P59594|SPIKE_SARS -KLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRF-QPFQQFGRDVSDFT-DSVRDPKTSEI 570 . *.::.: . * *:: . . . : SP|P0DTC2|SPIKE_SARS2 LDITPCSFGGVSVITPGTNTSNQVAVLYQDVNCTEVPVAIHADQLT--PTWRVYSTGSNV 642 SP|K9N5Q8|SPIKE_MERS1 YCLRACVSVPVSVIYD--KETKTHATLFGSVACEHISSTMSQYSRSTRSMLKRRDSTYGP 706 SP|Q0ZME7|SPIKE_CVHN5 YTILPCYSGRVSAAFY--QNSSSPALLYRNLKCSYVLNNIS--FIS----------QPFY 712 SP|P36334|SPIKE_CVHOC FMIRSCYSGRVSAAFH--ANSSEPALLFRNIKCNYVFNNSLTRQLQ----------PINY 716 SP|P15423|SPIKE_CVH22 YSITPCNPPDQLVVYQQ------------AVVGAMLSENFTSYGFS-----NVVELPKFF 534 SP|Q6Q1S2|SPIKE_CVHNL FIVTPCNQPDQVAVYQQ------------SIIGAMTAVNESRYGLQ-----NLLQLPNFY 715 SP|P59594|SPIKE_SARS LDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVSTAIHADQLT--PAWRIYSTGNNV 628 : * . : SP|P0DTC2|SPIKE_SARS2 FQTRAGCLIGAEHVN--NSYECDIPIGAGICASYQTQT-NSPRRARSVASQSI---IAYT 696 SP|K9N5Q8|SPIKE_MERS1 LQTPVGCVLGLVNSS-LFVEDCKLPLGQSLCALPDTPSTLTPRSVRSVPGEMRLASIAFN 765 SP|Q0ZME7|SPIKE_CVHN5 FDSYLGCVLNAVNLTSYSVSSCDLRMGSGFCIDYALPSSRRKRRGISSPYRFVT-FEPFN 771 SP|P36334|SPIKE_CVHOC FDSYLGCVVNAYNSTAISVQTCDLTVGSGYCVDYSK--NRRSRGAITTGYRFTN-FEPFT 773 SP|P15423|SPIKE_CVH22 YASNGT-----YNCT----DAVLTYSSFGVCADGSIIA-VQPR---NVSYDSVS------ 575 SP|Q6Q1S2|SPIKE_CVHNL YVSNGG-----NNCT----TAVMTYSNFGICADGSLIP-VRPR---NSSDNGIS------ 756 SP|P59594|SPIKE_SARS FQTQAGCLIGAEHVD--TSYECDIPIGAGICASYHTVS-L----LRSTSQKSI---VAYT 678 : : . . * . SP|P0DTC2|SPIKE_SARS2 MSLG-AENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQ 755 SP|K9N5Q8|SPIKE_MERS1 HPIQ-V-DQLNSSYFKLSIPTNFSFGVTQEYIQTTIQKVTVDCKQYVCNGFQKCEQLLRE 823 SP|Q0ZME7|SPIKE_CVHN5 VSFVNDSVETVGGLFEIQIPTNFTIAGHEEFIQTSSPKVTIDCSAFVCSNYAACHDLLSE 831 SP|P36334|SPIKE_CVHOC VNSVNDSLEPVGGLYEIQIPSEFTIGNMVEFIQTSSPKVTIDCAAFVCGDYAACKSQLVE 833 SP|P15423|SPIKE_CVH22 ----------AIVTANLSIPSNWTTSVQVEYLQITSTPIVVDCSTYVCNGNVRCVELLKQ 625 SP|Q6Q1S2|SPIKE_CVHNL ----------AIITANLSIPSNWTTSVQVEYLQITSTPIVVDCATYVCNGNPRCKNLLKQ 806 SP|P59594|SPIKE_SARS MSLG-ADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQ 737 : **:::: . * : : :** ::*.. * . * : SP|P0DTC2|SPIKE_SARS2 YGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPP-----IKDFGGF-NFSQILP-D 808 SP|K9N5Q8|SPIKE_MERS1 YGQFCSKINQALHGANLRQDDSVRNLFASVKSSQSSPI-----IPGFGGDFNLTLLEP-V 877 SP|Q0ZME7|SPIKE_CVHN5 YGTFCDNINSILNEVNDLLDITQLQVANALMQGVTLSSNLNTNLHSDVDNIDFKSLLGCL 891 SP|P36334|SPIKE_CVHOC YGSFCDNINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSPVLGCL 893 SP|P15423|SPIKE_CVH22 YTSACKTIEDALRNSARLESADVSEMLTFDKKAFTLAN-----VSSFGD-YNLSSVIPSL 679 SP|Q6Q1S2|SPIKE_CVHNL YTSACKTIEDALRLSAHLETNDVSSMLTFDSNAFSLAN-----VTSFGD-YNLSSVLPQR 860 SP|P59594|SPIKE_SARS YGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPT-----LKYFGGF-NFSQILP-D 790 * * :: * .: . . : . ::. : SP|P0DTC2|SPIKE_SARS2 P---SKPSKRSFIEDLLFNKVTLADAGFIK-QYGDCL--GDIAARDLICAQKFNGLTVLP 862 SP|K9N5Q8|SPIKE_MERS1 SISTGSRSARSAIEDLLFDKVTIADPGYMQ-GYDDCMQQGPASARDLICAQYVAGYKVLP 936 SP|Q0ZME7|SPIKE_CVHN5 GSQCGS-SSRSLLEDLLFNKVKLSDVGFVE-AYNNCT--GGSEIRDLLCVQSFNGIKVLP 947 SP|P36334|SPIKE_CVHOC GSECSKASSRSAIEDLLFDKVKLSDVGFVE-AYNNCT--GGAEIRDLICVQSYKGIKVLP 950 SP|P15423|SPIKE_CVH22 PTSGSRVAGRSAIEDILFSKLVTSGLGTVDADYKKCT--KGLSIADLACAQYYNGIMVLP 737 SP|Q6Q1S2|SPIKE_CVHNL NIRSSRIAGRSALEDLLFSKVVTSGLGTVDVDYKSCT--KGLSIADLACAQYYNGIMVLP 918 SP|P59594|SPIKE_SARS P---LKPTKRSFIEDLLFNKVTLADAGFMK-QYGECL--GDINARDLICAQKFNGLTVLP 844 : ** :**:**.*: :. * :. * .* ** *.* * *** SP|P0DTC2|SPIKE_SARS2 PLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKL 922 SP|K9N5Q8|SPIKE_MERS1 PLMDVNMEAAYTSSLLGSIAGVGWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKL 996 SP|Q0ZME7|SPIKE_CVHN5 PILSETQISGYTTAATVAAMFPPWSAA----AGVPFSLNVQYRINGLGVTMDVLNKNQKL 1003 SP|P36334|SPIKE_CVHOC PLLSENQISGYTLAATSASLFPPWTAA----AGVPFYLNVQYRINGLGVTMDVLSQNQKL 1006 SP|P15423|SPIKE_CVH22 GVADAERMAMYTGSLIGGIALGGLTSA----VSIPFSLAIQARLNYVALQTDVLQENQKI 793 SP|Q6Q1S2|SPIKE_CVHNL GVADAERMAMYTGSLIGGMVLGGLTSA----AAIPFSLALQARLNYVALQTDVLQENQKI 974 SP|P59594|SPIKE_SARS PLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQ 904 : : ** : . : . :** : *:* :.: :** :*** SP|P0DTC2|SPIKE_SARS2 IANQFNSAIGKIQDSLSSTA--------------SALGKLQDVVNQNAQALNTLVKQLSS 968 SP|K9N5Q8|SPIKE_MERS1 IANKFNQALGAMQTGFTTTN--------------EAFHKVQDAVNNNAQALSKLASELSN 1042 SP|Q0ZME7|SPIKE_CVHN5 IANAFNKALLSIQNGFTATN--------------SALAKIQSVVNANAQALNSLLQQLFN 1049 SP|P36334|SPIKE_CVHOC IANAFNNALYAIQEGFDATN--------------SALVKIQAVVNANAEALNNLLQQLSN 1052 SP|P15423|SPIKE_CVH22 LAASFNKAMTNIVDAFTGVNDAITQTSQALQTVATALNKIQDVVNQQGNSLNHLTSQLRQ 853 SP|Q6Q1S2|SPIKE_CVHNL LAASFNKAINNIVASFSSVNDAITQTAEAIHTVTIALNKIQDVVNQQGSALNHLTSQLRH 1034 SP|P59594|SPIKE_SARS IANQFNKAISQIQESLTTTS--------------TALGKLQDVVNQNAQALNTLVKQLSS 950 :* **.*: : .: . *: *:* .** :..:*. * .:* SP|P0DTC2|SPIKE_SARS2 NFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATK 1028 SP|K9N5Q8|SPIKE_MERS1 TFGAISASIGDIIQRLDVLEQDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDK 1102 SP|Q0ZME7|SPIKE_CVHN5 KFGAISSSLQEILSRLDNLEAQVQIDRLINGRLTALNAYVSQQLSDITLIKAGASRAIEK 1109 SP|P36334|SPIKE_CVHOC RFGAISASLQEILSRLDALEAEAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEK 1112 SP|P15423|SPIKE_CVH22 NFQAISSSIQAIYDRLDTIQADQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQK 913 SP|Q6Q1S2|SPIKE_CVHNL NFQAISNSIQAIYDRLDSIQADQQVDRLITGRLAALNAFVSQVLNKYTEVRGSRRLAQQK 1094 SP|P59594|SPIKE_SARS NFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATK 1010 * *** : * .*** :: : *:****.*** :*:.:*:: * . * * SP|P0DTC2|SPIKE_SARS2 MSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKA- 1087 SP|K9N5Q8|SPIKE_MERS1 VNECVKAQSKRSGFCGQGTHIVSFVVNAPNGLYFMHVGYYPSNHIEVVSAYGLCDAANPT 1162 SP|Q0ZME7|SPIKE_CVHN5 VNECVKSQSPRINFCGNGNHILSLVQNAPYGLLFIHFSYKPTSFKTVLVSPGLCLSGDR- 1168 SP|P36334|SPIKE_CVHOC VNECVKSQSSRINFCGNGNHIISLVQNAPYGLYFIHFSYVPTKYVTARVSPGLCIAGDR- 1171 SP|P15423|SPIKE_CVH22 VNECVKSQSKRYGFCGNGTHIFSIVNAAPEGLVFLHTVLLPTQYKDVEAWSGLCVDGTN- 972 SP|Q6Q1S2|SPIKE_CVHNL INECVKSQSNRYGFCGNGTHIFSIVNSAPDGLLFLHTVLLPTDYKNVKAWSGICVDGIY- 1153 SP|P59594|SPIKE_SARS MSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYVPSQERNFTTAPAICHEGKA- 1069 :.*** .** * .***:* *:.*: ** *: *:* *:. .:* . SP|P0DTC2|SPIKE_SARS2 --HFPREGVFVSN-----GTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDP 1140 SP|K9N5Q8|SPIKE_MERS1 NCIAPVNGYFIKTNNTRIVDEWSYTGSSFYAPEPITSLNTKYVAPQVTYQN-ISTNLPPP 1221 SP|Q0ZME7|SPIKE_CVHN5 -GIAPKQGYFIKQ-----NDSWMFTGSSYYYPEPISDKNVVFMNSCSVNFTKAPFIYL-- 1220 SP|P36334|SPIKE_CVHOC -GIAPKSGYFVNV-----NNTWMYTGSGYYYPEPITENNVVVMSTCAVNYTKAPYVML-- 1223 SP|P15423|SPIKE_CVH22 -GYVLRQPNLALY---KEGNYYRITSRIMFEPRIPTMADFVQIENCNVTFVNISRSEL-- 1026 SP|Q6Q1S2|SPIKE_CVHNL -GYVLRQPNLVLY---SDNGVFRVTSRVMFQPRLPVLSDFVQIYNCNVTFVNISRVEL-- 1207 SP|P59594|SPIKE_SARS --YFPREGVFVFN-----GTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDP 1122 . : : * : *. : . SP|P0DTC2|SPIKE_SARS2 LQ--PELDSFKEELDKYFKNHTSP-DVDLGDISGINASVVNIQK--------------EI 1183 SP|K9N5Q8|SPIKE_MERS1 LLGNSTGIDFQDELDEFFKNVSTS-IPNFGSLTQINTTLLDLTY--------------EM 1266 SP|Q0ZME7|SPIKE_CVHN5 NNSIPNLSDFEAELSLWFKNHTSI-APNLTFNSHINATFLDLYY--------------EM 1265 SP|P36334|SPIKE_CVHOC NTSIPNLPDFKEELDQWFKNQTSV-APDLSLD-YINVTFLDLQV--------------EM 1267 SP|P15423|SPIKE_CVH22 QTIVPEYIDVNKTLQELSYKLPNYTVPDL-VVEQYNQTILNLTSEISTLENKSAELNYTV 1085 SP|Q6Q1S2|SPIKE_CVHNL HTVIPDYVDVNKTLQEFAQNLPKYVKPNF-DLTPFNLTYLNLSSELKQLEAKTASLFQTT 1266 SP|P59594|SPIKE_SARS LQ--PELDSFKEELDKYFKNHTSP-DVDLGDISGINASVVNIQK--------------EI 1165 ..: *. : . :: * : ::: SP|P0DTC2|SPIKE_SARS2 DRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSC 1243 SP|K9N5Q8|SPIKE_MERS1 LSLQQVVKALNESYIDLKELGNYTYYNKWPWYIWLGFIAGLVALALCVFFILCCTGCGTN 1326 SP|Q0ZME7|SPIKE_CVHN5 NVIQESIKSLNSSFINLKEIGTYEMYVKWPWYIWLLIVILFIIFLMILFFICCCTGCGSA 1325 SP|P36334|SPIKE_CVHOC NRLQEAIKVLNQSYINLKDIGTYEYYVKWPWYVWLLICLAGVAMLVLLFFICCCTGCGTS 1327 SP|P15423|SPIKE_CVH22 QKLQTLIDNINSTLVDLKWLNRVETYIKWPWWVWLCISVVLIFVVSMLLLCCCSTGCCGF 1145 SP|Q6Q1S2|SPIKE_CVHNL VELQGLIDQINSTYVDLKLLNRFENYIKWPWWVWLIISVVFVVLLSLLVFCCLSTGCCGC 1326 SP|P59594|SPIKE_SARS DRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCCSC 1225 :: . :*.: ::*: :. * ****::** : : . .: *.* SP|P0DTC2|SPIKE_SARS2 LK-------GCCSCGSCCKF-DEDDSEPVLKGVKLHYT 1273 SP|K9N5Q8|SPIKE_MERS1 CM-------GKLKCNRCCDRYEEYDLEPHKVHVH---- 1353 SP|Q0ZME7|SPIKE_CVHN5 CF-------S--KCHNCCDEYGGHNDFVIK-ASHDD-- 1351 SP|P36334|SPIKE_CVHOC CF-------K--KCGGCCDDYTGYQELVIK-TSHDD-- 1353 SP|P15423|SPIKE_CVH22 FSCFASSIRGCCE--STKLPYYDVEKIHIQ-------- 1173 SP|Q6Q1S2|SPIKE_CVHNL CNCLTSSMRGCCDCGSTKLPYYEFEKVHVQ-------- 1356 SP|P59594|SPIKE_SARS LK-------GACSCGSCCKF-DEDDSEPVLKGVKLHYT 1255 . :
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